CDS

Accession Number TCMCG017C05657
gbkey CDS
Protein Id OMP07559.1
Location join(10783..10975,11083..11159,11828..11938,12144..12212,12800..12856,13025..13063,13172..13276,13441..13523,13621..13702,13861..14004,14093..14179,14291..14410)
GeneID InterPro:IPR024166
Organism Corchorus olitorius
locus_tag COLO4_07227

Protein

Length 388aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01013162.1
Definition Ribosomal RNA assembly KRR1 [Corchorus olitorius]
Locus_tag COLO4_07227

EGGNOG-MAPPER Annotation

COG_category A
Description Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K06961        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGAGCTAGATAATGTGGAAGAAGTAAATTTGCAACAGAAGAAGAAGCATAAAGGAAAACACGACAAGCCAAAGCCATGGGACGAAGACCCAAATATTGACCGTTGGAAGATTGAGAAGTTTGACCCTTCTTGGAACCCTGATGGGTTGCTCGAAGTTAGCTCCTTCTCCACTATCTTCCCCCGGTATCGAGAACAATACTTGCAAGAGGCTTGGCCAAAGGTTAAATCTGCTTTGAAAGAATATGGTATTGCTGCTGAGCTCAACTTGGTTGAAGGGTCCATGACTGTTTCAACTACAAGAAAAACTAGGGACCCATATATAATCATGAAAGCCAGGGATCTAATCAAGCTTCTATCAAGAAGTGTTCCTGCACCTCAGGCAATCAAAATTCTGGATGACGAAATGCAATGTGACATTATCAAAATTGGAAACTTGGTGCACAAAAAGGAACGGTTTGTTAAAAGAAGGCAGCGTCTTGTGGGGCCAAATTCTTCGACTTTGAAGGCACTTGAAATATTGACAGGCTGCTACATTCTTGTTCAGGGAAACACTGTTGCTGCTATGGGTTCATTCAAAGGTTTAAAACAACTCAGAAGGATTGTGGAAGACTGCATAGAGAATAGAATGCATCCTGTATACCATATCAAGATTCTCATGATGAAGAAAGAACTTGAGAAGGATCCATCACTTAAAAATGAAAACTGGGACAGGTTTCTTCCGAAGTTTAAGAAGAAAAATGTTAAGACAAAGAAGGTTAAGAGTAAGGAGAAGAAACCATATACACCCTTCCCTCCTCCTCAGCCACCTAGCAAGATTGATCAACAATTGGAATCTGGAGAGTACTTCTTGAGTGAGAAAAAGAAATTAGCTAAGAAATGGGAAGAGAAGCAGGAGAAGCAGGCACAGAAAACAGCAGAAAACAAGAGAAAAAGAGAAGAAGCATTTGTTCCTCCCAAGTGCGTCTTGCAGGAACCCGTCAATCAAGATTCTAACAAGTCAGAGAATGACAAGGAAGATGTTGCTGCCCTTGCCAAGTCCGTGAAGCAAAAGGCCAAGGAGTTTGGGAAGCAAAAATCTTTAGAAAATATCAATGCAGAAGAATATATTGAAGCCCCTGCTGGAGAACGACCTTCAAAAAAGAAAAAGAAATCCAAGCATACTTAG
Protein:  
MELDNVEEVNLQQKKKHKGKHDKPKPWDEDPNIDRWKIEKFDPSWNPDGLLEVSSFSTIFPRYREQYLQEAWPKVKSALKEYGIAAELNLVEGSMTVSTTRKTRDPYIIMKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVHKKERFVKRRQRLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQLRRIVEDCIENRMHPVYHIKILMMKKELEKDPSLKNENWDRFLPKFKKKNVKTKKVKSKEKKPYTPFPPPQPPSKIDQQLESGEYFLSEKKKLAKKWEEKQEKQAQKTAENKRKREEAFVPPKCVLQEPVNQDSNKSENDKEDVAALAKSVKQKAKEFGKQKSLENINAEEYIEAPAGERPSKKKKKSKHT